This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Demultiplex nanopore reads with custom barcodes

We have a problem trying to demultiplex MinION sequences with custom barcodes. Do you have any software recommendations we can try for demultiplexing or how to demultiplex these custom barcodes with Albacore? We have tried using albacore but it only recognizes barcodes provided by Nanopore Technologies.

ngs minion nanopore demultiplexing

If it are just fasta or fastq files you could use cutadapt or sabre I think

0 answers

No answers yet.

Log in to answer this question.