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5.1 years ago
Kristoffer Vitting-Seerup
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4.0k
I have my amino acid sequence of a transcript of interest in bioinformatic tools which can predict different types of annotation and/or functionality based on the sequence alone! Some of the classic would be Pfam and InterScanPro but I'm looking for new ideas :-)
Cheers Kristoffer
BLASTP (and associated alternative algorithms (PSI-BLAST etc). My personal favourite is HHPred (or HMMER).
Don't think you can do much better than InterProScan though personally.