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How to calculate coverage

Hi I´m new at bioinformatics can anyone tell me how can I calculate the coverage?

alignment genome sequencing
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written by kikko7798 • kikko7798

Do you specifically need to use the API? Most people use the command line tools.

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written by h.mon h.mon

Hi, Yes, the assignment requires that we use the API.

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written by kikko7798 • kikko7798

If this is an assignment, you should show what you tried and why it failed - you are expected to do the assignment yourself. Someone can provide pointers to correct your code, but don't expect a full answer.

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written by h.mon h.mon

Hi, Thanks, but I'm looking for some help on how to get started, pointers, etc. I'm looking at the API and there is little documentation or examples. I´m good with the program side of it. I'm doing some research on the mater but it's slow going. Any help, pointers how can I get started is very much appreciated. Also, I have little knowledge of genomics.

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written by kikko7798 • kikko7798

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