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Tool for 16s rRNA selection in metagenomic data

Hi, I am working with metagenomic data. I need a tool for rRNA selection from it. can anyone suggest a better tool for this ???

genome next-gen
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written by athira112athira • athira112athira

can anyone suggest a better tool for this ???

What have you tried so far?

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written by Sej Modha Sej Modha

I am trying to install tools called reago and EMIRGE, show errors during installation.

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written by athira112athira • athira112athira

Could you give a little more explanation for your problem? Because I am not able to understand what you are trying to do. You are doing metagenomic data analysis, so is it amplicon/16S rRNA gene sequencing or shotgun metagenome sequencing?

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written by Nitin Narwade Nitin Narwade

1 answer

Thank you for the replay ,

I want to know about both data.

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written by athira112athira • athira112athira

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