Off topic:merge Fastq or Bam file?
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5.4 years ago
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I have three technical replicates from RNA seq data, I like to merge them together. I would like to know is there any difference if I merge them after aligning (after aligning each one separately) as .bam file or I can do that before aligning when I have Fastq file then run alignment?

RNA-Seq alignment ChIP-Seq • 1.9k views
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