./configure wouldn't compile HMMER v3.2.1
I tried to compile HMMER v3.2.1 in Cygwin using ./configure followed by make or make install, but failed. I got this config.log file to troubleshoot and I suspect the solution is in this line: configure:2908: error: no acceptable C compiler found in $PATHWhat does it mean? Is it really all I need to address? I followed the installation steps in this document.
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
"C++ compiler cannot create executables", while installing ABySS 2.0 assembler
written by Vijith •
-
Cannot compile Lumpy-SV.
written by Ishak •
-
How to download seqret method in Linux?
written by seabed0705 •
-
Issues installing Vienna RNA on MacOS
written by emigc10 •
-
treemix make error
written by andrinajoro •
-
Filtering HmmScan Domain Results
written by hewaholax •
-
How to Install Augustus properly ?
written by kabir.deb •
-
Problem in execution of the commands in HMMER
written by PriyaD •
-
Install freebayes in cygwin
written by wei.shen •
-
Installing EMBOSS using Cygwin64 Terminal on windows
written by mossig89 •
With
cygwinyou are going to run into issues of one sort or the other. I assume you are not a cygwin exprt since you posted this question. It looks like you are missing GNU C compiler or it is not in your$PATH.If you are using Windows 10 then the preferred option is to install WSL (Windows subsystem for Linux) following the directions here. Multiple distros are available but you should use Ubuntu.