Unable to designate CSV column heads "as.factor" for R -Error

I am having an issue with assigning factors to my data CSV. Here is a summary of the data frame:

data.frame': 303 obs. of 12 variables:

PLOT : int 19 177 54 114 41 48 142 134 160 267 ...

RANGE : int 2 12 4 8 3 4 10 9 11 18 ...

ROW : int 4 12 9 9 11 3 7 14 10 12 ...

REP : int 1 1 1 1 1 1 1 1 1 1 ...

ENTRY : Factor w/ 184 levels "","17_YMG_0293",..: 40 40 77 82 87 88 102 103 103 6 ...

PLOT_ID : Factor w/ 301 levels "","18_HZG_OvOv_001",..: 20 178 55 115 42 49 143 135 161 268 ...

Shatter : num 9 9 9 9 9 9 9 9 9 8 ...

Chaff.Color : Factor w/ 4 levels "","*Blank ones are segregating in color",..: 3 4 3 4 4 4 3 4 4 3 ...

Heading_d.from.Jan.1: int 138 139 137 133 135 135 133 137 135 136 ...

Height_cm : int 74 73 77 76 74 79 78 73 76 70 ...

Plot.weight..kg. : num 0.26 0.18 0.19 0.14 0.33 0.19 0.13 0.11 0.24 0.18 ...

But I get this error:

HAYSData$Rep<-as.factor(HAYSData$Rep)

Error in $<-.data.frame(*tmp*, Rep, value = integer(0)) :

replacement has 0 rows, data has 303

I get the same type of error for Entry, Range, and Rows. I am not sure when I look at length(Entry) for example I get 300. I even tested with changing "as.factor" to "as.numeric" but it does not help.

I don't have an "na" in my data each category is its own column as well.

I don't know if something is wrong with my CSV. I have worked this same script with another CSV but no issues in the part of the script for the other data.

Can someone please help me?

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updated 7.7 years ago by jean.elbers

• written 7.7 years ago by wkmustahs21 •

Can you show the entire output of, for example, HAYSData$Rep and as.factor(HAYSData$Rep) ? Paste them here and wrap with the code button

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written 7.7 years ago by Kevin Blighe

So I did it two ways:

HAYSData$REP

[1] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 >1 1 1 1 1 1 1

[55] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 >1 1 1 1 1 1 1 1

[109] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1

1 1 1 1 1 1 1 1

[163] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1

1 1 1 1 1 1 1 1

[217] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1

1 1 1 1 1 1 1 1

[271] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 NA NA NA

then I wrote it as in the script:

HAYSData$Rep

NULL

This is what I have when I write "as.factor(HAYSData$REP)"

[1] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1

[33] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1

[65] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1

[97] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 .....[289] 1 1 1 1 1 1 1 1 1 1 1 1 <na> <na> <na> Levels: 1

For just "as.factor(HAYSData$Rep) :

as.factor(HAYSData$Rep)

factor(0)

One thing I notice is that my headers in my CSV are in Caps Lock ...so could this be a reason of why R is not recognizing my headers correctly?

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written 7.7 years ago by wkmustahs21 •

Yes, R is case sensitive. That looks like the issue.

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written 7.7 years ago by Kevin Blighe

1 answer

Try

HAYSData$Rep<-as.factor(paste(HAYSData$Rep))

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written 7.7 years ago by jean.elbers