I am M.Sc Student an working on project for Bisulphite sequecning data analysis(DNA Methylation). Can some one pls share some most commonly/famous used tools in this field?
Common tools for which steps? Have you searched for any? You'll find that if you flip through the methods section of a couple papers you can pretty quickly get an idea what tools are popular (not that that necessarily makes them better).
See also the Bisulfite sequencing section on omictools
Bismark, Bicycle, gemBS, BSeeker
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