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Estimating the purity of tumor cells in gene expression microarray data
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12 months ago
IRAN

Hi Is there any tool for defining the tumor cell purity in gene expression microarray data?

Thanks in advance

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Have you searched the World Wide Web? There appears to be solutions for methylation arrays.

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You might need to clarify what kind of array that you are talking about. Like methylation, expression, or SNP chip.

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13 months ago
WCIP | Glasgow | UK

Hi- If it's genotyping arrays you are referring to, then you could try ASCAT. ASCAT is designed to detect copy number variants and it gives, in addition, the purity estimate.

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