This is a test version of Biostars. For the public version, visit https://www.biostars.org.
What does "." mean in transcript ID?

Hi, everyone.

I have transcript IDs as below, what does . mean? Are these two ID are same?

ENST00000318325.6
ENST00000318325.2
transcript ncbi ensembl

2 answers

Hello,

the number after the . is the version of the transcript.

See here.

When talking/writing about transcript one should always add the information about the version and the reference genome.

fin swimmer

In some cases it might also point to isoforms of a specific gene. But that's not gonna be the case here I think

EDIT: after consulting people from Ensembl it turns out my comment above is not holding true for the emsembl IDs, so can safely be ignored in this specific case!

Those numbers after the '.' indicate the transcript version, see also https://m.ensembl.org/info/genome/stable_ids/index.html

Log in to answer this question.