Psuedoautosomal regions in reference genome
Hi,
I have reference genome (ARS-UCD1.2_Btau5.0.1Y). How can I check if that genome contain pseudoautosomal region on both chromosomes and also how can I find that regions in gff file?
How can I check also, how many reads have been aligned to pseudoautosomal regions.
thank you
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
How to get information (Count) of Unique Mapped Reads to the Genome?
written by ramshahaya •
-
Amplicon sequencing and unwanted amplicons
written by misterie
-
Checking regions with high density of SNPs
written by misterie
-
Pseudoautosomal regions in cow
written by misterie
-
Number of genomes sequences in NCBI
written by misterie
-
Number of genomes sequences in NCBI
written by misterie
-
Number of genomes sequences in NCBI
written by misterie
-
How to know which reads were not aligned to a reference genome?
written by Charles Yin
-
Extract parts of reads from BAM file that overlap a specific region of genome
written by Chadi Saad
-
How to find % alignment of total reads to genic region?
written by sun.nation
