Clarification on GDC Methylation data
I need to work with methylation data. GDC provides a vast dataset of methylation-array samples.
I noticed that for all the probes, they associate one or more ENSEMBL transcript ID.
My (most probably stupid) question is: are these data a sort of "Whole Exome Sequencing" rather than a "Whole Genome Sequencing"? I mean, does GDC for any reason provide only information about the exome, similarly to what they do for somatic mutations?
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
News: Cancer Genomics workshop
written by Physalia-courses
-
Job: Bioinformatics Research Associate, Genomics and Genetics at Vanderbilt University, USA
written by JP •
-
Genotype information required in Clonality analysis using Pyclone
written by nilesh.gardi2688 •
-
Variant Calling and Transcript expression from biological sample
written by Mask
-
Where to get somatic mutations from WGS data?!
written by dankoc •
-
raw data (fastq files) of whole exome sequencing (WES) of somatic mutations
written by abedkurdi10 •
-
Forum: Discrepancy between Whole Exome Sequence result and Sanger Sequence result
written by haiying.kong
-
Publicly available somatic variant calls for kidney cancer using WGS
written by tralynca •
-
Comparing exome sequencing data sample with vastly different read coverage
written by matthew.1.davies •
-
Detecting Cancer Somatic Mutations From Multi-Sample Low-Pass Wgs Data
written by User 2032 •
