This is a test version of Biostars. For the public version, visit https://www.biostars.org.
wget UCSC Table Browser

How can I download UCSC Table Browser data using wget or any command line tool. I need to download it on a computing cluster that doen't have a UI.

table browser ucsc wget

1 answer

use mysql: https://genome.ucsc.edu/goldenpath/help/mysql.html or wget in the download area: http://hgdownload.soe.ucsc.edu/goldenPath/hg38/database/

Log in to answer this question.