gene copy numbers in an genome
Where can I find gene copy numbers of each gene found in the genome?
If any way to extract information from reliable databases?
• 2,213 views
•
link
written
by
Dattatray Mongad
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Detect a sequence without assembling... and counting number of reads?
written by keypuncher •
-
Methylation coordinates for hg19
written by Parham
-
The exon numbers of each transcript,
written by haasroni •
-
get original symbol for a non model organism
written by mjavad2012 •
-
Extract flanking region of -500 nt upstream and downstream of BLAST result on genome using perl scr…
written by adhirajnath14 •
-
BPGA - how to update KEGG and COG database?
written by Dattatray Mongad
-
Genome annotation to KEGG KO ids
written by Dattatray Mongad
-
GO analysis of a gene set
written by sumudu_rangika •
-
Database Of Prokaryotic Genome-Wide Protein Homologs
written by devolver1 •
-
How To Extract Introns Positions And Domains From Entrez Gene Xml?
written by Dror •
There were some posts about that:
Count Gene Copy Numbers In Whole Genome Sequence
Gene copy number analysis from genome sequences
Copy number variation in different species
This article looks helpful:
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4330915/
Some database is mentioned here:
http://www.gene-quantification.de/cnv.html
and here: https://gene.sfari.org/