This is a test version of Biostars. For the public version, visit https://www.biostars.org.
I have a lot of part can not install in R

When I try to install RSkittleBrewer/org.Hs.eg.bd/Deeptools/Ngsplot/SeqPlots always get this kind of informations(below). Did someone have a good way to deal with? Thanks!

Warning in install.packages :
  package ‘org.Hs.eg.bd’ is not available (for R version 3.5.0)
r
• 2,446 views • link
written by mikysyc2016 mikysyc2016

How are you trying to install org.Hs.eg.db (note it is .db and not .bd)? Are you using BioConductor?

• 1 views • link
written by h.mon h.mon

I use R studio, I also can not install Bioconductor.

• 1 views • link
written by mikysyc2016 mikysyc2016

yes, but it doesn't work for me.

• 1 views • link
written by mikysyc2016 mikysyc2016

You should tell us what happens, not just 'it does not work'.

• 1 views • link
written by WouterDeCoster WouterDeCoster

in R studio console, type : setRepositories(). A repository list would appear and request you to select repositories you would like to use (with prompt 1:). Type: 1 2 3 4 5 and press enter. Then type install.packages("org.Hs.eg.db") and wait. At first, few error messages appear, ignore them. Then it starts installing package. Make sure that rstudio/package installer access to the installation folder.

• 1 views • link
written by cpad0112 cpad0112

Hi, Thank you so much for your valuable guidance, your answer was reasonable and accurate.

• 0 views • link
written by Morteza Hadizadeh • Morteza Hadizadeh

I use R studio, I also can not install Bioconductor.

• 0 views • link
written by mikysyc2016 mikysyc2016

0 answers

No answers yet.

Log in to answer this question.

More posts like this