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Robinson Foulds Distance to compare rooted trees?

Hey, is it possible to use the Robinson Foulds Distance the same way to compare rooted trees as it is to do so for unrooted trees? I read its possible to compare rooted and unrooted trees using R-F distance. Is that true? Cheers, Imogen

alignment rna-seq sequence sequencing

1 answer

Yes, look at the compare function of the ETE toolkit.

It has modes for rooted and unrooted comparisons.

Im not sure why this question is tagged with RNAseq?

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