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Rooting a tree based on taxonomy of species

Do you know any method that takes as input an unrooted tree and the taxonomy of the species of the sequences and that is able to return a rooted tree ?

I know Ranger-DTL (Duplication-Transfer-Loss) that does nearly that but it takes a rooted species tree as input. My problem is that my trees often mixes various domains of lifes and viruses so I have no rooted species tree.

thanks very much

phylogeny

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