Can we look at interactions between host genome and pathogen genome from Hi-C data?
0
0
Entering edit mode
5.9 years ago
c_u ▴ 520

I have Hi-C data from human cells that were infected with a virus. It's possible that the virus genome interacts with the host (human) genome. Is it possible to find out these interactions from this Hi-C data?

(maybe by somehow finding reads that, say, did not match to the human genome, or those that match the viral genome? just an idea! )

genome genomics human genome interactions • 1.1k views
ADD COMMENT

Login before adding your answer.

Traffic: 2683 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6