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How to perform KaKs_Calculator from SNPEff's output

Hi, all,

I have obtained the annotated SNP (VCF file) by SNPEff. How to calculate ka/ks using KaKs_Calculator or other programs.

rna-seq
• 1,933 views • link
written by smallfish • smallfish
  1. KaKs_Calculator requires sequences in the .axt format not SNPs.
  2. What is the goal of using KaKs_Calculator?
• 1 views • link
written by jean.elbers jean.elbers

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