any tool to join reads regardless of overlap?
I'm hoping to find a tool that will merge reads if there's a non-ambiguous overlap, and join the rest of the reads with some symbol, like a number of hyphens or NNNNs. I vaguely remember finding a tool that can do it but now I can't remember. Help is appreciated!
• 1,574 views
•
link
written
by
from the mountains
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Web server/tool for structural motif prediction on multiple proteins?
written by pl559 •
-
circexplorer2 output
written by npont •
-
How to extract reads for HLAscan
written by from the mountains
-
retrieve matched genome/annotation pairs using Ensembl API
written by glarue •
-
Identifying mismatches between read mates at position in genome
written by wpearman1996 •
-
Best statistical test for 1 vs 2 replicates
written by from the mountains
-
in silico enrichment
written by kamhamea •
-
Python - Joining Overlapping DNA sequences
written by st.ph.n
-
[Cytoscape] Merge nodes by column/attribute
written by enricoferrero
-
Bowtie Accuracy
written by Arpssss •
Not sure I understand what you mean, but for merging paired reads for instance there is this tool https://jgi.doe.gov/data-and-tools/bbtools/bb-tools-user-guide/bbmerge-guide/