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Substitution model testing tool for linux command line

Mega 7 has a function to find best DNA models, it will give a complete analyze table with parameters

In linux command line, is there a package that can do this job? I want to validate the results from Mega. Thank you.

substitution model
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updated by h.mon h.mon • written by shadowstep • shadowstep

1 answer

There are jModelTest2 (I believe it has been retired) and ModelTest-NG (sucessor of jModelTest). IQ-TREE also apparently can also perform substitution model selection. There are some other older tools, but I think those are the most recent ones.

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written by h.mon h.mon

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