convert locus tags or RvNumber to gene ID

Is there any tool or software that can convert locus tags or RvNumber to Gene ID or Gene Name?

gene genome

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written 8.3 years ago by shimms.sa •

Please furnish an example for input and expected output.

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written 8.3 years ago by cpad0112

You can do this using a Python script that interacts with Entrez's esearch utility, and the online DAVID tool can also do mappings. Take a look here: DAVID not accepting locus_tag identifiers. Alternatives?

You will have to customise the script to your own system and your species of interest.

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written 8.3 years ago by Kevin Blighe

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