Metagenome Analysis of mycobacterium tuberculosis
Hello everyone we are doing project on tuberculosis for my academics in college, we are about find the interaction between TB and human inorder to findout the interaction, we have completed around 50% of our project, we have encountered the problem on (how to find similar genes in metagenome of TB and human complete genome?) Can anyone suggest any online tools for this ? we have already treid installing magic blast but we dont know to use this software
please suggest any tools are softwares.
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sushma9devi •
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Try to use OMA-program or OrthoDB.
https://omabrowser.org/standalone/
Here (link below) you can just insert your protein sequence and see what happens:
https://omabrowser.org/oma/home/
OR use orthodb:
http://www.orthodb.org/
They are mentioned in the following post:
A: Blast thresholds for orthologs search in bacteria