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cpath is not available for cytoscape?

I am following the cytoscape protocol from nature paper. However, I can't find cpath plugins in cytoscape app store anymore.

Is it being disabled? For human protein interaction, is there other types of apps could do the same thing?

Thanks,

protein interaction
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updated by cannin cannin • written by bxia bxia

2 answers

I think cPath is the ancestor of Pathway Commons whose Cytoscape plugin is CyPath2.

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written by Jean-Karim Heriche Jean-Karim Heriche

The last versions of the old PC plugins for Cytoscape 2.8 are still available here: https://sourceforge.net/projects/biopax/files/other/cytoscape2_plugins/ The new one (which is called not plugin but app), for Cytoscape 3 is called CyPath2 and available in the Cytoscape Apps Store.

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written by cannin cannin

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