Which tool is best for Annotation of human vcf files (Snpeff or VEP or Annovar) ?
Which tool is best for Annotation of human vcf files from (Snpeff or VEP or Annovar) ?
• 5,139 views
•
link
updated
by
JJ
•
written
by
kirti.amity •
•
written
by
kirti.amity •
2 answers
I don't think that there is a better tool, it all comes down to what you need. I used SnpEff and found it really nice and working, but others might say the same for Annovar or VEP.
• 0 views
•
link
written
by
Matteo Schiavinato
Log in to answer this question.
More posts like this
-
hgvs annotation from VCF
written by J.F.Jiang
-
Annotating variants using latest version fof the genome
written by prasundutta87
-
VCF annotation, logic, Annovar, VEP, snpEff
written by vaish01kv •
-
Annotating varscan2 output
written by ar.satkhol18 •
-
Reproducing this picture
written by zizigolu
-
More general annotation using snpEff
written by misterie
-
VCF file (annotated with snpeff) to MAF
written by JJ
-
VEP and Annovar Annotation
written by BAGeno
-
Recent comparison between variant effect prediction tools, mainly SnpEff v.s. Ensembl VEP
written by William
-
Questions About Annotation Of Mouse Exome Variants Data By Annovar
written by Tonyzeng •
