Ploting the reads overlap Gene
Hello,
I have the following information:
- gene start and end bps within the chromosome, and exons within the gene.
- Reads overlap this gene (start position, end position, length,..)
Now, the question is how can I draw this reads in (R) as segments overlapping the regions(hope my question is clear) I tried to attached picture but I didnt know how to do..
1 answer
Log in to answer this question.
More posts like this
-
Plotting overlapping genomic segments within the same file with R
written by moithuti •
-
Struggling to filter data with R, tidyverse
written by davidfarr01 •
-
featureCount vs GENCODE gene lengths
written by user31888
-
Count the fragments from BAM file
written by Lolla •
-
Sequences information from BAM file
written by Lolla •
-
Trying to get a distribution of Exon lengths and Intron lengths.
written by remi.b.md
-
Finding All The Genes That Are In A Given Set Of Genomic Co-Ordinates Using R
written by Ankur •
-
How To Determine Overlaps From Coordinates
written by k.nirmalraman
-
Finding Fasta Coordinates That Do Not Overlap
written by ashtx •
-
Mapping Genome Coordinates From Ensembl Biomart Fasta Header To Sequence
written by Marcel Schilling •
Post the image elsewhere and then link to it.
The same way how CIs look like on plot..