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I am looking for a way that I can assign functions to a thousands of proteins in a Fasta file

Hi guys. I have a fasta file with thousands of protein sequences. Now I have used blast to gather their functions. I am seeking an easy method that would allow me to describe each protein. Please help

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updated by h.mon h.mon • written by 201314918 • 201314918

simple question without an easy answer I'm afraid.

Can you elaborate a bit more on the question?

you already have a blast result and want to parse it? you're just looking for the best approach to assign (potential !!) function to proteins?

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written by lieven.sterck lieven.sterck

1 answer

Try some transcriptome / proteome annotation tool, see here and here for recommendations.

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written by h.mon h.mon

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