retrieving the hidden table from ensembl
In Ensembl, the table is written using javascript code. is there anyway to retrieve this table using programming... since this table is hidden in the source code
multiprocessing
multithreading
pool
• 1,443 views
•
link
written
by
jananiinfo14 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Retrieval of specific classes from an Ontology
written by fawazfebinIs there any way to retrieve specific classes (and the terms under it) of an ontology using any programming language? Great thanks in advance!
-
How to calculate per site transition probability between hidden states.
written by taniamahmood38 •Dear all, I am running Pool-HMM tool on my pool-seq pileup data. In it, there is an argument -k (or --k) value, where value is …
-
diferentially expressed ensembl ID to gene symbol conversion
written by imaparna27 •Hi, I am trying to convert my whole list of deferentially expressed genes (DEG) to their respective HGNC symbols against ensembl ID that I have …
-
biomaRt external_gene_name same entry multiple times when mapping to homolog mouse gene
written by nhaus •Hello, I am trying to convert human gene names to mouse gene names using `biomaRt`. Here is the code I am using: library("biomaRt") ensembl = …
-
retrieve a table of genes for mouse
written by Eliran Turgeman •I need to store locally a table that contains 3 columns - gene symbol, refseq id, ensembl id. (mouse) I have been able to retrieve …
-
CpG islands prediction
written by eng.sheren1975 •how can i use the probability with Hidden Markov to predict the Cp G islands in DNA sequence (source code with python)
-
how to get protparam physico and chemical properties for each sequence using perl programming?
written by jananiinfo14 •I have lot of protein sequence in one file. I need protparam physico and chemical prperties for each sequence.how to get the information using perl …
-
how can i get acertainment sample size in dpSNP for all variants of some 15000 genes
written by jananiinfo14 •I have above 15000 genes.each gene contain lot of variants and structure variants.In dpSNP database contains acertainment sample size for all variants.I need all sample …
-
Any difference between biomaRt package and biomart tab on the website?
written by M KHi everyone, I am trying to retrieve gene information from ensembl website to compare the the gene information for mouse(mm10) with repetitive DNA is specific …
-
What Does A Dynamic Programming Table For An Hmm Look Like?
written by corn8bit •<p>I've been learning about how HMMs (<a href='http://en.wikipedia.org/wiki/Hidden_Markov_model'>hidden markov models</a>) are used for finding sequencing errors, and to discover the hidden data we use a …
What are you after ? If you need data from Ensembl there are much better ways. Or do you want the javascript code that writes tables ? In this case, just ask the Ensembl developers.
You could use ensembl API.