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for transcript analysis, STAR or Hisat ?

Hi,

Which aligner to use ? and what is the reason ?

Could you share a link to an article that compares them ?

rna-seq alignment
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updated by GenoMax GenoMax • written by XBria XBria

1 answer

Here you go.

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written by GenoMax GenoMax

This is exactly what I was looking for !

Thank you very Much !

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written by XBria XBria

Dear genomax,

Could you please also share some links to the papers in which STAR gives better results than Hisat ?

Thanks in advance

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written by XBria XBria

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