Question

Getting the variants from EnsEMBL

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6.5 years ago

keerthuguna96 • 0

can you please give an idea to get all the variants for all the gene from EnsEMBL?? If you give in perl script it would be much better

EnsEMBL genes variants • 1.1k views

ADD COMMENT • link updated 6.5 years ago by Astrid_Ensembl ▴ 330 • written 6.5 years ago by keerthuguna96 • 0

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what about your previous question ???? data retrieval from dbSNP?

ADD REPLY • link 6.5 years ago by Pierre Lindenbaum 161k

score 2 · Answer 1 · 2017-11-08

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6.5 years ago

Astrid_Ensembl ▴ 330

Genome-wide variation data is available in GVF and VCF format for many species from our FTP server: https://www.ensembl.org/info/data/ftp/index.html You will also find VEP cache files here.

ADD COMMENT • link 6.5 years ago by Astrid_Ensembl ▴ 330