Getting the variants from EnsEMBL
can you please give an idea to get all the variants for all the gene from EnsEMBL?? If you give in perl script it would be much better
• 1,471 views
•
link
updated
by
Astrid_Ensembl
•
written
by
keerthuguna96 •
•
written
by
keerthuguna96 •
1 answer
Genome-wide variation data is available in GVF and VCF format for many species from our FTP server: https://www.ensembl.org/info/data/ftp/index.html You will also find VEP cache files here.
• 0 views
•
link
written
by
Astrid_Ensembl
Log in to answer this question.
More posts like this
-
Counting abundance of each gene in SAM/BAM file
written by Hansen_869 •
-
Tool: Single cell rnaseq analysis pipeline available
written by datanerd
-
getting the variants with rs id
written by keerthuguna96 •
-
data retrieval from dbSNP?
written by keerthuguna96 •
-
How find variants between 26 genes sequence
written by misbahabas •
-
Help for finding the right FASTA file for kallisto
written by swamyvinny •
-
Downloading all introns from Ensembl for Grch37
written by mmacd •
-
How to get the protein sequence of a transcript variant (Ensembl Perl API) ?
written by nathan.alary •
-
How To Use Bioperl
written by Sahil •
-
Perl Or Python Script To Calculate Phi,Psi Angle Of A Pdb File
written by Siddharth •
what about your previous question ???? data retrieval from dbSNP?