suggested value for SP (Phred-scaled strand bias P-value) Samtools mpileup
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6.5 years ago

Hi everyone!

i'm setting up the --output-tags in my samtools mpileup command line. I want also to include SP (Phred-scaled strand bias P-value), according to the samtools documentation (http://www.htslib.org/doc/samtools-1.3.html) it seems that SP needs a value inside the square brackets. in the documentation it is reported SP [null], should i leave "null" as a default vale or should i change it? any suggestion?

Thank you very much.

samtools mpileup strand bias SP • 2.0k views
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