Question

Tell Canonical Isoform/Trancsript in gencode

1

Entering edit mode

6.5 years ago

mollitz ▴ 90

Hey,

is there a way to tell which of the transcripts for a given gene corresponds to the canonical isoform in the Gencode dataset? I couldn't find such information anywhere.

Best

gencode hg19 canonical isoform GRCh37.hg19 • 2.0k views

ADD COMMENT • link updated 6.5 years ago by Emily 23k • written 6.5 years ago by mollitz ▴ 90

score 5 · Accepted Answer · 2017-10-30

5

Entering edit mode

6.5 years ago

Emily 23k

APPRIS have carried out principal isoform analysis on the GENOCDE transcripts. These are also available in Ensembl.

ADD COMMENT • link 6.5 years ago by Emily 23k