Analyze of beta barel proteins

Dear All,

I was wondering how can I can automatically download and analyze all the structures of beta barel proteins having only 12 strands from pdb sites?

I am trying to use CATH database and/or SCOP data bases. I can find about beta barel proteins:

http://www.cathdb.info/browse/sunburst?from_cath_id=2.40

But still I dont know how to get this only for 12-stranded beta-barrels. Thank you for your kind suggestion.

With best regards

alignment pdb scop cath

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written 8.8 years ago by mdavari •

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