R package to plot mutational frequency
Does anyone know the R or python package used to produce an image as given below. I would like to plot tumor frequency models. Thanks
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Have a look at following packages...
GenVisR (parameter mutBurden)
https://bioconductor.org/packages/devel/bioc/vignettes/GenVisR/inst/doc/GenVisR_intro.html
maftools
https://bioconductor.org/packages/devel/bioc/vignettes/maftools/inst/doc/maftools.html
How to create a mutation landscape (waterfall) plot with GenVisR
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I don't know if there is a package for that, but you can use ggplot geom_jitter to do something similar. It's not the same, but it will let you see the distribution of the individual values.

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