Predict the effect of SNPs in a VCF file generated using a Trinity assembly
Is there software or script available to predict the effect of SNPs that have Trinity headers? Reference databases use different header formats than Trinity, so I can't use snpEff etc.
There must be a solution to this. Maybe not?
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Istvan Albert
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TrentGenomics •
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TrentGenomics •
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You can build custom annotations for SnpEff from a GFF file:
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Istvan Albert
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