Is there any software/tool that can be used to identify/count the number of feed forward loops and feedback loops in the gene regulatory networks?
Hi all Is there any bioinformatics software/tool that can be used to identify/ count the number of Feed Forward loops [FFLs] and Feedback loops [FBLs] in a biological network, say for example, a gene regulatory network?
Thanks
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There is a Cytoscape plugin called NetMatch http://apps.cytoscape.org/apps/netmatch . You draw the motif and it finds it in the network.
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