Promoter sequence analysis

I have the sequence of an unknown novel promoter. What tools should I use to find homologs and how does annotating regulatory features help me characterize the unknown sequence? I tried BLAST, but didn't get any significant results.

sequence blast

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updated 9.0 years ago by Biostar

• written 9.0 years ago by mj2000 •

Hello mj2000!

It appears that your post has been cross-posted to another site: https://www.reddit.com/r/bioinformatics/comments/6ue3w5/promoter_sequence_analysis_tools/?st=j6hk7a15&sh=875e00e7

This is typically not recommended as it runs the risk of annoying people in both communities.

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written 9.0 years ago by Emily

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