No significant differential methylated regions in control and eutopic samples comparison
Hi,
I analysed methylation patterns of three samples with using "seqlm" package, one is control sample and two others are ectopic and eutopic samples in a disorder. When i get pairwise methylation patterns, there is not any significant DMRs in eutopic-control samples comparison because all DMRs have at least 0.3 FDR value. FDR threshold for two other samples were 0.05. any idea?
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