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all samples in 0 cluster
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2.9 years ago
kyc92dream • 0

hi, i am novice in Plink, does anybody know why over 200 samples were classified into 0 cluster (i do not think they have been clustered...) ? My data format is made properly as i successfully calculated ld in plink, but i am not quite sure what is wrong with cluster and pca option is not available either.

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Just a guess, but many clustering programs I have seen reserve cluster 0 for all the elements that properly speaking are singletons...

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