Dear specialists of bioinformatics, I would like to identify candidate genes directly regulated by a transcription factor (TF) from the list of differentially expressed genes …

Hello Everyone, I am trying to find the transcription factor,of the gene PFKL, which binds to the regulatory region of the DNA. PFKL is the …

I'm working on Transcription factors involved in secondary metabolite. This plant doesn't have whole genome sequence, So we did RNA-seq analysis for it. From RNA-seq …

Dear Biostars, Hi (*'m not native in English*) I have seen in some papers that via blasting the assembled transcriptome against some TF database, the …

Hello, Currently, I want to make a list of Transcription factor-target gene pair. From this [ensembl regulatory database][1] I got the location of regulation region. …

1) Define genome promoter occupancy of Transcription Factor (distinguished shared versus specific binding of the components). 2) Combine data from TF binding with RNA-seq data …

<p>hello everybody.<br /> is there any transcription factors and their target genes database.i have selected some transcription factors from my transcriptome data from an insect.now …

Hello everyone, I have a set of differentially expressed genes in an "A" tissue when compared with other tissues, most of these genes being typical …

Hello! We all know that through ChIP-seq experiments a lot of binding sites are identified for a transcription factor but the major question which remains(or …

<p>I am working on co-expression analysis of rice gene expression data using WGCNA approach. I have obtained a number of gene clusters. I am interested …