Analyzing uploaded metagenomes (MG-RAST) through commandline
Is there a way to run analysis on data that has been uploaded to MG-RAST from command line. Say I want to analyze the 40 metagenomes against the RefSeq database. I have about 40 samples and when I run analysis using the browser, it takes too long and the computer crashes.
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Unable to register for MG-RAST
written by naveedhasan2000 •
-
Taxonomic annotation of selected genes
written by tpellegrinetti •
-
mg rast
written by Auroshis •
-
Transfer from one MG-RAST project to another generated "undefined" sample names
written by Jigyasa •
-
How to download the complete database Nucleotide collection (nr/nt)?
written by marongiu.luigi
-
local blastp against NR database
written by Chirag Parsania
-
MG-RAST server upload problem
written by hk.song15 •
-
how to get all metagenomes containing a secific species in one run in MG-RAST
written by marinezeng •
-
Taxonomic assignments to metagenomic sequences
written by jolespin
-
MG-RAST upload problem
written by susan.klein •
