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Sequence uniformity cov

I wan to generate sequence uniformity coverage plot like this :enter image description here

any recommendation for package or tools other den bamQC/multi-bamQC & TEQC?

I have multiple samples and i want to plot for all together.

rna-seq sequencing next-gen
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updated by trausch 202 • | written by #### 22

1 answer

Alfred generates coverage plots per base if that's what you are looking for. Example pdf report for a sample with multiple read groups is here.

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written by trausch 202

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