Greetings!

I am doing some analysis in R using sqldf package. The file contains SQL queries of OrthoMCL. It is working fine for the small files but with the larger files (Size of the file is 26 GB) it started to give me error:

Error in if (n > 0) c(NA_integer_, -n) else integer() :

missing value where TRUE/FALSE needed

Calls: rbind -> rbind -> structure -> .set_row_names

In addition: Warning messages:

1: In Make.row.names(nmi, ri, ni, nrow):

NAs introduced by coercion to integer range

2: In nrow + ni : NAs produced by integer overflow

I am unable to understand the rbind error. I looked at other question (Error with fdrtool in R ) having similar error but I couldn't figure it out. The code for rbind is written as follows:

BestHit2 <- list()
for (i in 1:length(args)){
  b <- read.table(args[i],sep="\t",header=T)
  BestHit2 <- rbind(BestHit2,b)
}

Any help would be appreciated!