considering q- value for up/down regulated genes
I have cuffdiff files from Illumina platform including control and treated FPKMs, log2 fold change, p-value, q-value, test stat and significance values . To choose differentially expressed genes (up/down regulated genes) respect to fold change, I would like to know whether I should only select those genes with <0.05 q- values.
Thank you in advance
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ahmadvandra •
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Please don't be hurry in posting questions. Just take some time to understand how postings, updating works.
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EDITthe question withEDIToption.PhD in plant biotechnology
Thank you for your reply. The wrong title was just an intentionally mistake.