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file "_peaks.bed" on macs2

Hi

I did PeakCalling with Macs2. I need to file format "_peaks.bed". But in the new version, does not exist the file format "_peaks.bed" .

How can I get the file "_peaks.bed" from the output Macs2?????? What ideas you have???

Thanks

chip-seq macs2 peakcall
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updated by Biostar Biostar • written by Brice222 • Brice222

1 answer

Depending on whether you are calling narrow or broad peaks, the file you are looking for is .narrowPeaks or .broadPeaks ... these are both bed files.

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written by BioinfGuru BioinfGuru

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