how to convert fasta format to certain format
Dear All, I'm new here. When I deal with my small RNA-seq data, I want to remove non-mirna seq. So, i blast my clean reads to rfam and get trna and rrna, now I meet some problem when I change my data format. Now my fasta data is like:
>seq1
ATATATATAT
>seq2
CGCGCGCGC
But I want to convert it to
>seq1 ATATATATAT
>seq2 CGCGCGCG
which have two column so that this format can be easy to remove certain sequence in R.
Anyone can help me?
Thanks a lot!!
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yangzituo •
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Side note: This Fasta file from *.tab file is the exact opposite question.
Hello yangzituo!
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Cheers!
Hey thanks for your reply, but wait a min how do I change the second format back to first format?
See my first comment for the reverse action or: Fasta file from *.tab file