I have performed de novo assembly of a plant mitogenome (non-model plant). In addition, I also perform de novo transcriptome assembly of this particular plant …
What software is proper for the reference guided de novo assmebly and annotation of the Betula birch chloroplast genome? We have tried BBMap, MIRA, NextGene, …
What software to choose to do reference-assisted Birch Betula chloroplast genome assembly and subsequent annotation? I have tried de novo assembly using BBMap, NextGene`s DeBrujin …
Does anyone have experience using validation/evaluation methods (other than basic statistics like N50) for a PacBio only de novo assembly? What would you recommend? Note: …
Hello matveyspr!
Questions similar to yours can already be found at:
We have closed your question to allow us to keep similar content in the same thread.
If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.
Cheers!