Would this galaxy workflow work for Hiseq sequencing
I came across this galaxy workflow that was originally used with 454 sequences.
https://usegalaxy.org/u/aun1/p/windshield-splatter
I was wondering if it would also work with Hi-seq data (HiSeq 2500 2x125 PE)
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You may want to post over at Galaxy biostar.
That said it may only be appropriate in principal. Would need changes to accommodate for different data.