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downloading nirK nitrite reductase (NO-forming) [EC:1.7.2.1] from KEGG

I want to create an index for nirK gene in Bowtie. On KEGG nitrogen metabolism pathway, there are 8714 gene related to EC: 1.7.2.1. How can I download them all in a single FASTA file for later use in Bowtie.

Is there any fastest possible way to download these gene.

alignment rna-seq
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updated by yzzhang • yzzhang • written by muhammad.ali • muhammad.ali

Any reason you want to get them all? This would be multi-mapping galore, if you are trying to align short read data to this set.

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written by GenoMax GenoMax

I should be in great quantities. Many ways to restrict, I'll stringent criteria etc.

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written by muhammad.ali • muhammad.ali

1 answer

Here is another source for downloading the nirK gene sequences fungene_nirK hope it helps

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written by yzzhang • yzzhang

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