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Which yeast genes would have the most similar gene expression pattern?

I would like to test my model. Therefore, I would need to know where I can find a list of yeast genes, which can be sorted based on their similarities in their expression pattern. Where could I find such a list or how could I generate it?

rna-seq genome gene functional geomics
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updated by theobroma22 theobroma22 • written by tfhahn • tfhahn

Which yeast genes would have the most similar gene expression pattern?

The genes associated with ribosome biogenesis are described as being tighly co-regulated "to ensure that the components of the ribosome are available in equimolar amounts". The economics of ribosome biosynthesis in yeast.

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written by Carlo Yague Carlo Yague

2 answers

You can get yeast gene expression datasets from public repositories such as ArrayExpress. SGD' SPELL resource has integrated expression data which may be closer to what you want.

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written by Jean-Karim Heriche Jean-Karim Heriche

You could just simulate it and make a synthetic dataset by using a certain distribution, like any random or beta distribution with a pre-determine mean and variance.

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written by theobroma22 theobroma22

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